Searching in Shewanella oneidensis MR-1 (MR1)
Found 3 curated entries in PaperBLAST's database that match 'propionyl-CoA synthetase' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO2743: acetyl-coenzyme A synthetase (NCBI ptt file) is similar to: | PaperBLAST |
YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli | 38% id, 99% cov |
PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium | 37% id, 99% cov |
| SO1971: AMP-binding family protein (NCBI ptt file) is similar to: | PaperBLAST |
PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium | 23% id, 86% cov |
YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli | 30% id, 13% cov |
| SO1744: AMP-binding protein (NCBI ptt file) is similar to: | PaperBLAST |
YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli | 26% id, 53% cov |
PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium | 26% id, 52% cov |
| SO2581: long-chain-fatty-acid--CoA ligase (NCBI ptt file) is similar to: | PaperBLAST |
PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium | 24% id, 55% cov |
YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli | 25% id, 44% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1998926-2000926 (frame +2) on 139 is similar to: | PaperBLAST |
YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli | 44% id, 99% cov |
PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium | 44% id, 99% cov |
Lawrence Berkeley National Laboratory