Searching in Shewanella oneidensis MR-1 (MR1)
Found 3 curated entries in PaperBLAST's database that match 'sorbitol-6-phosphate dehydrogenase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella oneidensis MR-1, or try another query
SO2776: 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file) is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 32% id, 97% cov |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 31% id, 99% cov |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 30% id, 99% cov |
SO1683: 3-oxoacyl-(acyl-carrier-protein) reductase, putative (NCBI ptt file) is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 30% id, 97% cov |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 29% id, 98% cov |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 29% id, 98% cov |
SO3263: 3-oxoacyl-(acyl-carrier-protein) reductase, putative (NCBI ptt file) is similar to: | PaperBLAST |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 29% id, 99% cov |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 29% id, 97% cov |
SO0438: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file) is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 31% id, 70% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory