Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 35 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO2213: oligo-1,6-glucosidase (NCBI ptt file)
is similar to:
PaperBLAST

6lgbA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase complexed with glucose

33% id,
99% cov

6lggA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase mutant e322q complexed with sucrose

33% id,
99% cov

6lgfA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase mutant d247n complexed with sucrose

33% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory