Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2827: oxidoreductase, aldo/keto reductase family
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

58% id,
96% cov

XYL1_PYRO7 / G4N708: NAD(P)H-dependent D-xylose reductase XYR1; XR; EC 1.1.1.307 from Pyricularia oryzae

22% id,
92% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

28% id,
49% cov

More...

HP15_833: 2,5-diketo-D-gluconic acid reductase B
is similar to:
PaperBLAST

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

34% id,
93% cov

XYL1_CANTE / O74237: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Candida tenuis
O74237: D-xylose reductase (EC 1.1.1.307) from Yamadazyma tenuis

34% id,
93% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

32% id,
97% cov

More...

HP15_740: oxidoreductase Tas, aldo/keto reductase family protein
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

29% id,
88% cov

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

23% id,
93% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

26% id,
79% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2971425-2972513 (frame -3) on CP001978
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis
Also see hits to annotated proteins above

57% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory