Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 7 curated entries in PaperBLAST's database that match '1.1.1.31' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_910: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa

70% id,
99% cov

Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri

54% id,
99% cov

AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

53% id,
100% cov

More...

HP15_1343: 2-hydroxy-3-oxopropionate reductase
is similar to:
PaperBLAST

AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

36% id,
98% cov

mmsB / Q76KL5: 3-hydroxyisobutyrate dehydrogenase subunit (EC 1.1.1.31) from Pseudomonas putida
Q76KL5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas putida

35% id,
97% cov

MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa

35% id,
97% cov

More...

HP15_1515: 6-phosphogluconate dehydrogenase domain protein
is similar to:
PaperBLAST

MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa

34% id,
99% cov

AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

32% id,
99% cov

Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri

32% id,
98% cov

More...

HP15_3486: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa

35% id,
95% cov

Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri

34% id,
97% cov

mmsB / Q76KL5: 3-hydroxyisobutyrate dehydrogenase subunit (EC 1.1.1.31) from Pseudomonas putida
Q76KL5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas putida

32% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory