Curated BLAST
Searching in Marinobacter adhaerens HP15 (Marino)
Found 72 curated entries in PaperBLAST's database that match '1.1.1.42' as complete word(s).
These curated entries have 51 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Marinobacter adhaerens HP15, or try another query
HP15_3800: isocitrate dehydrogenase, NADP-dependent is similar to: | PaperBLAST |
V5VCI0: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Acinetobacter baumannii | 67% id, 100% cov |
O53611: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Mycobacterium tuberculosis | 67% id, 100% cov |
idh / Q8L0X8: isocitrate dehydrogenase (EC 1.1.1.42) from Chlorobium limicola | 63% id, 100% cov |
Q1XIQ9: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Colwellia psychrerythraea | 63% id, 99% cov |
IDH_AZOVI / P16100: Isocitrate dehydrogenase [NADP]; IDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Azotobacter vinelandii icd / P16100: isocitrate dehydrogenase (NADP-dependent) (EC 1.1.1.42) from Azotobacter vinelandii | 62% id, 99% cov |
A0A0E3SSZ6: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Methanococcoides methylutens | 61% id, 100% cov |
IDH_CORGL / P50216: Isocitrate dehydrogenase [NADP]; IDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Corynebacterium glutamicum P50216: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Corynebacterium glutamicum | 60% id, 100% cov |
B2ZAA4: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Streptomyces lividans | 58% id, 100% cov |
More... |
HP15_1832: 3-isopropylmalate dehydrogenase is similar to: | PaperBLAST |
P96318: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Caldococcus noboribetus | 29% id, 92% cov |
Q1GZD1: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Methylobacillus flagellatus | 28% id, 95% cov |
Q9YE81: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Aeropyrum pernix | 27% id, 89% cov |
icd / RF|YP_144801.1: isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus P33197: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus | 35% id, 69% cov |
icd / Q5UXA4: isocitrate dehydrogenase, NADP (EC 1.1.1.42) from Haloarcula marismortui | 24% id, 72% cov |
IDH_HALVD / D4GU92: Isocitrate dehydrogenase [NADP]; IDH; ICDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Haloferax volcanii | 28% id, 37% cov |
A8YGS2: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Microcystis aeruginosa | 28% id, 33% cov |
More... |
HP15_817: 3-isopropylmalate dehydrogenase is similar to: | PaperBLAST |
icd / Q5UXA4: isocitrate dehydrogenase, NADP (EC 1.1.1.42) from Haloarcula marismortui | 27% id, 92% cov |
IDH_COXBU / Q9ZH99: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Coxiella burnetii | 26% id, 91% cov |
IDH_BACSU / P39126: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Bacillus subtilis icd / GB|CAB14873.1: isocitrate dehydrogenase; EC 1.1.1.42 from Bacillus subtilis | 28% id, 85% cov |
IDH_PSEAB / Q02NB5: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Pseudomonas aeruginosa | 28% id, 83% cov |
Q1GZD1: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Methylobacillus flagellatus | 26% id, 88% cov |
Q1XIQ8: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Colwellia psychrerythraea | 27% id, 83% cov |
D0Z8Y6: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Edwardsiella tarda | 25% id, 85% cov |
IDH_ECOLI / P08200: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Escherichia coli IcdE / b1136: isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli icd / P08200: isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli | 25% id, 85% cov |
icd / B2ZP83: isocitrate dehydrogenase subunit (EC 1.1.1.42) from Helicobacter pylori | 24% id, 85% cov |
Q9YE81: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Aeropyrum pernix | 26% id, 78% cov |
icd / RF|YP_144801.1: isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus P33197: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus | 31% id, 60% cov |
Q9HLV8: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermoplasma acidophilum | 28% id, 37% cov |
A8YGS2: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Microcystis aeruginosa | 26% id, 25% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory