Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 89 curated entries in PaperBLAST's database that match '1.13.11.2'.

These curated entries have 67 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_4031: catechol 2,3-dioxygenase
is similar to:
PaperBLAST

Q8KLV4: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas stutzeri

82% id,
100% cov

xylE / P06622: subunit of catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
P06622: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
Q7BH44: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.
T1WIF8: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

82% id,
100% cov

T1WJ05: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

81% id,
100% cov

More...

HP15_1110: catechol 2,3-dioxygenase
is similar to:
PaperBLAST

xylE / P06622: subunit of catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
P06622: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
Q7BH44: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.
T1WIF8: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

79% id,
94% cov

Q8KLV4: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas stutzeri

79% id,
94% cov

T1WJ05: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

79% id,
94% cov

More...

HP15_4030: chloroplast-type ferredoxin
is similar to:
PaperBLAST

P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

56% id,
79% cov

HP15_934: extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
is similar to:
PaperBLAST

DODA_BETVU / Q70FG7: 4,5-DOPA dioxygenase extradiol; EC 1.13.11.29 from Beta vulgaris
DODA / Q70FG7: 4,5-DOPA dioxygenase extradiol (EC 1.13.11.29) from Beta vulgaris

39% id,
96% cov

YGID_ECOLI / P24197: 4,5-DOPA dioxygenase extradiol; EC 1.13.11.29 from Escherichia coli
YgiD / b3039: 4,5-DOPA dioxygenase extradiol (EC 1.13.11.29) from Escherichia coli
ygiD / P24197: 4,5-DOPA dioxygenase extradiol (EC 1.13.11.29) from Escherichia coli

39% id,
92% cov

DODA_PORGR / Q7XA48: 4,5-DOPA dioxygenase extradiol; EC 1.13.11.29 from Portulaca grandiflora
DODA / Q7XA48: 4,5-DOPA-dioxygenase (EC 1.13.11.29) from Portulaca grandiflora

38% id,
95% cov

More...

HP15_3310: pirin family protein
is similar to:
PaperBLAST

PIR_MOUSE / Q9D711: Pirin; Probable quercetin 2,3-dioxygenase PIR; Probable quercetinase; EC 1.13.11.24 from Mus musculus

41% id,
90% cov

PIR_HUMAN / O00625: Pirin; Probable quercetin 2,3-dioxygenase PIR; Probable quercetinase; EC 1.13.11.24 from Homo sapiens

40% id,
90% cov

YHHW_ECOLI / P46852: Quercetin 2,3-dioxygenase; Quercetinase; Pirin-like protein YhhW; EC 1.13.11.24 from Escherichia coli
YhhW / b3439: quercetin 2,3-dioxygenase (EC 1.13.11.24) from Escherichia coli
yhhW / P46852: quercetin 2,3-dioxygenase (EC 1.13.11.24) from Escherichia coli

37% id,
32% cov

HP15_32: glyoxalase/bleomycin resistance protein/dioxygenase
is similar to:
PaperBLAST

HSAC_RHOJR / Q9KWQ5: Iron-dependent extradiol dioxygenase; EC 1.13.11.25 from Rhodococcus jostii
hsaC / Q9KWQ5: 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase monomer (EC 1.13.11.25) from Rhodococcus jostii

35% id,
99% cov

HSAC_MYCTU / P9WNW7: Iron-dependent extradiol dioxygenase; EC 1.13.11.25 from Mycobacterium tuberculosis
hsaC / P9WNW7: 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase monomer (EC 1.13.11.25) from Mycobacterium tuberculosis

33% id,
99% cov

tesB / Q9FAE3: 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase (EC 1.13.11.25) from Comamonas testosteroni

32% id,
98% cov

More...

HP15_1109: chloroplast-type ferredoxin-like protein
is similar to:
PaperBLAST

P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

58% id,
57% cov

HP15_1679: pirin
is similar to:
PaperBLAST

PIR_MOUSE / Q9D711: Pirin; Probable quercetin 2,3-dioxygenase PIR; Probable quercetinase; EC 1.13.11.24 from Mus musculus

31% id,
83% cov

PIR_HUMAN / O00625: Pirin; Probable quercetin 2,3-dioxygenase PIR; Probable quercetinase; EC 1.13.11.24 from Homo sapiens

29% id,
83% cov

HP15_1408: pirin domain protein
is similar to:
PaperBLAST

YHHW_ECOLI / P46852: Quercetin 2,3-dioxygenase; Quercetinase; Pirin-like protein YhhW; EC 1.13.11.24 from Escherichia coli
YhhW / b3439: quercetin 2,3-dioxygenase (EC 1.13.11.24) from Escherichia coli
yhhW / P46852: quercetin 2,3-dioxygenase (EC 1.13.11.24) from Escherichia coli

27% id,
79% cov

HP15_945: protein containing immunoglobulin I-set domain
is similar to:
PaperBLAST

QDOI_ASPJA / Q7SIC2: Quercetin 2,3-dioxygenase; 2,3QD; Flavonol 2,4-dioxygenase; Quercetinase; EC 1.13.11.24 from Aspergillus japonicus
Q7SIC2: quercetin 2,3-dioxygenase subunit (EC 1.13.11.24) from Aspergillus japonicus

27% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory