Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 17 curated entries in PaperBLAST's database that match '1.13.11.2' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_4031: catechol 2,3-dioxygenase
is similar to:
PaperBLAST

Q8KLV4: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas stutzeri

82% id,
100% cov

xylE / P06622: subunit of catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
P06622: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
Q7BH44: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.
T1WIF8: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

82% id,
100% cov

T1WJ05: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

81% id,
100% cov

More...

HP15_1110: catechol 2,3-dioxygenase
is similar to:
PaperBLAST

xylE / P06622: subunit of catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
P06622: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
Q7BH44: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.
T1WIF8: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

79% id,
94% cov

T1WJ05: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

79% id,
94% cov

Q8KLV4: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas stutzeri

79% id,
94% cov

More...

HP15_4030: chloroplast-type ferredoxin
is similar to:
PaperBLAST

P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

56% id,
79% cov

HP15_1109: chloroplast-type ferredoxin-like protein
is similar to:
PaperBLAST

P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

58% id,
57% cov

HP15_32: glyoxalase/bleomycin resistance protein/dioxygenase
is similar to:
PaperBLAST

Q842G7: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

29% id,
56% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory