Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 23 curated entries in PaperBLAST's database that match '1.13.12.2'.

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3154: class II aldolase/adducin family protein
is similar to:
PaperBLAST

novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus

31% id,
80% cov

CLOR_STRRC / Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase; Bifunctional non-heme iron oxygenase; Clorobiocin biosynthesis protein CloR; EC 1.13.11.83; EC 1.13.12.23 from Streptomyces roseochromogenus
Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase (EC 1.13.11.83); 4-hydroxy-3-prenylbenzoate synthase (EC 1.13.12.23) from Streptomyces roseochromogenus

32% id,
71% cov

HP15_1585: oxidoreductase, FAD/FMN-binding protein
is similar to:
PaperBLAST

AO356_14230: lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

45% id,
14% cov

AO353_07420: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

45% id,
14% cov

Pf6N2E2_4778: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

45% id,
14% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory