Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 5 curated entries in PaperBLAST's database that match '1.2.1.20' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2020: succinate-semialdehyde dehydrogenase I
is similar to:
PaperBLAST

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

64% id,
100% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

64% id,
100% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

64% id,
100% cov

More...

HP15_3404: succinic semialdehyde dehydrogenase
is similar to:
PaperBLAST

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

44% id,
100% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

45% id,
99% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

44% id,
99% cov

More...

HP15_3626: betaine aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

37% id,
98% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

36% id,
98% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

36% id,
98% cov

More...

HP15_4032: betaine aldehyde dehydrogenase
is similar to:
PaperBLAST

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

36% id,
99% cov

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

36% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

36% id,
97% cov

More...

HP15_943: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

37% id,
96% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

35% id,
96% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

35% id,
96% cov

More...

HP15_1111: betaine aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

36% id,
97% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

36% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

36% id,
97% cov

More...

HP15_3945: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

36% id,
97% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

36% id,
96% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

36% id,
97% cov

More...

HP15_3144: NAD-dependent aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

35% id,
97% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

34% id,
98% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

34% id,
98% cov

More...

HP15_3039: N-succinylglutamate 5-semialdehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

35% id,
96% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

33% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

33% id,
96% cov

More...

HP15_2688: trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

34% id,
93% cov

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

34% id,
92% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

33% id,
96% cov

More...

HP15_2655: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

33% id,
95% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

32% id,
95% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

32% id,
94% cov

More...

HP15_906: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

29% id,
96% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

29% id,
96% cov

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

29% id,
96% cov

More...

HP15_2154: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

29% id,
96% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

28% id,
96% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

28% id,
94% cov

More...

HP15_3329: NAD-dependent aldehyde dehydrogenase
is similar to:
PaperBLAST

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

28% id,
90% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

27% id,
91% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

27% id,
91% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory