Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 23 curated entries in PaperBLAST's database that match '1.3.8.4' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 23 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

78% id,
99% cov

Sama_1362: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella amazonensis

78% id,
99% cov

liuA / Q9I296: isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa

77% id,
98% cov

More...

HP15_1005: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

78% id,
99% cov

Sama_1362: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella amazonensis

78% id,
99% cov

liuA / Q9I296: isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa

77% id,
98% cov

More...

HP15_3339: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

AidB / b4187: putative acyl-CoA dehydrogenase AidB (EC 1.3.8.4) from Escherichia coli
AidB / P33224: isovaleryl-CoA dehydrogenase and DNA-binding transcriptional repressor (EC 1.3.8.4) from Escherichia coli

46% id,
96% cov

B5UB85: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Bombyx mori

26% id,
68% cov

IVD_RAT / P12007: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Rattus norvegicus
P12007: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Rattus norvegicus

26% id,
67% cov

More...

HP15_618: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

39% id,
96% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

36% id,
97% cov

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

37% id,
95% cov

More...

HP15_1008: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

38% id,
97% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

37% id,
96% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

37% id,
97% cov

More...

HP15_907: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

36% id,
99% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

35% id,
98% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

34% id,
98% cov

More...

HP15_56: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

37% id,
96% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

37% id,
96% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

37% id,
95% cov

More...

HP15_3215: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

36% id,
96% cov

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

36% id,
98% cov

Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

36% id,
96% cov

More...

HP15_2539: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

36% id,
94% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

36% id,
95% cov

PS417_17015: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas simiae

36% id,
94% cov

More...

HP15_3936: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

34% id,
97% cov

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

33% id,
98% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

32% id,
98% cov

More...

HP15_4141: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

33% id,
97% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

32% id,
97% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

31% id,
98% cov

More...

HP15_3928: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

29% id,
97% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

31% id,
90% cov

Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

30% id,
90% cov

More...

HP15_821: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

28% id,
98% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

26% id,
97% cov

liuA / Q9I296: isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa

26% id,
97% cov

More...

HP15_53: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

28% id,
98% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

28% id,
96% cov

Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

28% id,
97% cov

More...

HP15_3929: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

28% id,
97% cov

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

26% id,
98% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

31% id,
81% cov

More...

HP15_3923: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

27% id,
98% cov

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

22% id,
95% cov

IVD_HUMAN / P26440: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Homo sapiens

23% id,
87% cov

More...

HP15_2479: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

27% id,
98% cov

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

25% id,
98% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

26% id,
88% cov

More...

HP15_2576: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

27% id,
92% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

26% id,
96% cov

IVD_ARATH / Q9SWG0: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; EC 1.3.8.4 from Arabidopsis thaliana
Q9SWG0: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Arabidopsis thaliana

25% id,
99% cov

More...

HP15_3696: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

25% id,
99% cov

Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

25% id,
98% cov

AO356_01580: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

25% id,
98% cov

More...

HP15_2478: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q75N94: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Aspergillus oryzae

28% id,
88% cov

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

28% id,
89% cov

PS417_17015: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas simiae

25% id,
96% cov

More...

HP15_267: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

IVD_RAT / P12007: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Rattus norvegicus
P12007: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Rattus norvegicus

26% id,
84% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

28% id,
63% cov

Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

29% id,
60% cov

More...

HP15_3375: acyl-coenzyme A dehydrogenase
is similar to:
PaperBLAST

B5UB85: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Bombyx mori

25% id,
82% cov

Q75N94: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Aspergillus oryzae

29% id,
67% cov

IVD_ARATH / Q9SWG0: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; EC 1.3.8.4 from Arabidopsis thaliana
Q9SWG0: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Arabidopsis thaliana

28% id,
70% cov

More...

HP15_54: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

IVD_SOLTU / Q9FS87: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Isovaleryl-CoA dehydrogenase 2; St-IVD2; EC 1.3.8.4 from Solanum tuberosum
Q9FS87: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Solanum tuberosum

21% id,
81% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

27% id,
46% cov

Q75N94: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Aspergillus oryzae

30% id,
37% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 24 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2618003-2619790 (frame -1) on CP001978
is similar to:
PaperBLAST

Q75N94: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Aspergillus oryzae
Also see hits to annotated proteins above

27% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory