Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 8 curated entries in PaperBLAST's database that match '1.3.8.6' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 21 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3936: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

69% id,
99% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

67% id,
100% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

68% id,
97% cov

More...

HP15_2: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

35% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

33% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

33% id,
94% cov

More...

HP15_1005: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

35% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

33% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

33% id,
94% cov

More...

HP15_618: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

33% id,
96% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

32% id,
95% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

32% id,
91% cov

More...

HP15_907: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

32% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

31% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

31% id,
94% cov

More...

HP15_2539: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

30% id,
91% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

29% id,
92% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

31% id,
83% cov

More...

HP15_56: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

29% id,
93% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

29% id,
93% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

29% id,
93% cov

More...

HP15_1008: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

29% id,
93% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

28% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

26% id,
94% cov

HP15_2479: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

30% id,
84% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

30% id,
84% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

28% id,
85% cov

More...

HP15_4141: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

27% id,
93% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

26% id,
93% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

25% id,
93% cov

HP15_3928: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

27% id,
93% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

26% id,
92% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

25% id,
93% cov

More...

HP15_3696: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

29% id,
85% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

31% id,
65% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

33% id,
62% cov

More...

HP15_3375: acyl-coenzyme A dehydrogenase
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

27% id,
90% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

29% id,
74% cov

GCDH_MOUSE / Q60759: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Mus musculus
Q60759: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Mus musculus

24% id,
88% cov

More...

HP15_3929: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

25% id,
95% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

25% id,
95% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

24% id,
94% cov

More...

HP15_3578: acyl-coenzyme A dehydrogenase
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

27% id,
86% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

24% id,
96% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

25% id,
90% cov

More...

HP15_3215: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

25% id,
94% cov

GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa

25% id,
93% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

24% id,
94% cov

More...

HP15_821: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

25% id,
95% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

24% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

24% id,
85% cov

HP15_267: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

27% id,
81% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

30% id,
59% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

31% id,
55% cov

More...

HP15_2478: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa

28% id,
76% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

32% id,
63% cov

GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens
Q92947: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Homo sapiens

28% id,
70% cov

More...

HP15_53: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens
Q92947: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Homo sapiens

26% id,
64% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

26% id,
56% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

25% id,
56% cov

More...

HP15_54: acyl-CoA dehydrogenase domain protein
is similar to:
PaperBLAST

GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens
Q92947: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Homo sapiens

26% id,
38% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

30% id,
24% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

30% id,
24% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 21 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory