Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 7 curated entries in PaperBLAST's database that match '1.5.3.7' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3418: D-amino acid dehydrogenase small subunit
is similar to:
PaperBLAST

SOX_HUMAN / Q9P0Z9: Peroxisomal sarcosine oxidase; PSO; L-pipecolate oxidase; L-pipecolic acid oxidase; EC 1.5.3.1; EC 1.5.3.7 from Homo sapiens
Q9P0Z9: L-pipecolate oxidase (EC 1.5.3.7) from Homo sapiens

24% id,
34% cov

PIPOX / Q8N6Z6: L-pipecolate oxidase (EC 1.5.3.7) from Homo sapiens

25% id,
29% cov

HP15_4014: FAD dependent oxidoreductase
is similar to:
PaperBLAST

SOX_HUMAN / Q9P0Z9: Peroxisomal sarcosine oxidase; PSO; L-pipecolate oxidase; L-pipecolic acid oxidase; EC 1.5.3.1; EC 1.5.3.7 from Homo sapiens
Q9P0Z9: L-pipecolate oxidase (EC 1.5.3.7) from Homo sapiens

47% id,
13% cov

PIPOX / Q8N6Z6: L-pipecolate oxidase (EC 1.5.3.7) from Homo sapiens

47% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory