Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 14 curated entries in PaperBLAST's database that match '2.3.1.29' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2485: 8-amino-7-oxononanoate synthase is similar to:	PaperBLAST
BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus	42% id, 94% cov
RR42_RS28295: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Cupriavidus basilensis	41% id, 94% cov
Shewana3_4104: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Shewanella sp.	38% id, 95% cov
PGA1_c34330: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Phaeobacter inhibens	37% id, 96% cov
KBL_ECOLI / P0AB77: 2-amino-3-ketobutyrate coenzyme A ligase; AKB ligase; Glycine acetyltransferase; EC 2.3.1.29 from Escherichia coli Kbl / b3617: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli kbl: 2-amino-3-ketobutyrate coenzyme A ligase; EC 2.3.1.29 from Escherichia coli kbl / P0AB77: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli P0AB77: glycine C-acetyltransferase (EC 2.3.1.29) from Escherichia coli	37% id, 95% cov
KBL_HUMAN / O75600: 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; Aminoacetone synthase; Glycine acetyltransferase; EC 2.3.1.29 from Homo sapiens GCAT / O75600: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Homo sapiens	38% id, 91% cov
KBL_BOVIN / Q0P5L8: 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; Aminoacetone synthase; Glycine acetyltransferase; EC 2.3.1.29 from Bos taurus	38% id, 91% cov
KBL_MOUSE / O88986: 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; Aminoacetone synthase; Glycine acetyltransferase; EC 2.3.1.29 from Mus musculus	38% id, 92% cov
BWI76_RS27255: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Klebsiella michiganensis	36% id, 95% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2625347-2626534 (frame -1) on CP001978 is similar to:	PaperBLAST
BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus Also see hits to annotated proteins above	42% id, 95% cov
KBL_ECOLI / P0AB77: 2-amino-3-ketobutyrate coenzyme A ligase; AKB ligase; Glycine acetyltransferase; EC 2.3.1.29 from Escherichia coli Kbl / b3617: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli kbl: 2-amino-3-ketobutyrate coenzyme A ligase; EC 2.3.1.29 from Escherichia coli kbl / P0AB77: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli P0AB77: glycine C-acetyltransferase (EC 2.3.1.29) from Escherichia coli Also see hits to annotated proteins above	36% id, 97% cov
BWI76_RS27255: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Klebsiella michiganensis Also see hits to annotated proteins above	35% id, 97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory