Searching in Marinobacter adhaerens HP15 (Marino)
Found 66 curated entries in PaperBLAST's database that match '2.4.2.4'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Marinobacter adhaerens HP15, or try another query
| HP15_2259: methylthioadenosine phosphorylase is similar to: | PaperBLAST |
MTIP_PSEAE / Q9HZK1: S-methyl-5'-thioinosine phosphorylase; 5'-methylthioinosine phosphorylase; MTI phosphorylase; MTIP; EC 2.4.2.44 from Pseudomonas aeruginosa | 60% id, 100% cov |
| HP15_2594: hypothetical protein is similar to: | PaperBLAST |
PpnP / b0391: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 53% id, 99% cov |
| HP15_3964: glycosyl transferase, family 39 is similar to: | PaperBLAST |
ABF11690.1: 4-amino-4-deoxy-L-arabinosyltransferase (ArnT;ArnTCm;Rmet_4828) (EC 2.4.2.43) | 27% id, 90% cov |
ARNT_YERPS / Q66A06: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Polymyxin resistance protein PmrK; Undecaprenyl phosphate-alpha-L-Ara4N transferase; EC 2.4.2.43 from Yersinia pseudotuberculosis | 27% id, 76% cov |
ARNT_ECOLI / P76473: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Polymyxin resistance protein PmrK; Undecaprenyl phosphate-alpha-L-Ara4N transferase; EC 2.4.2.43 from Escherichia coli | 26% id, 75% cov |
| HP15_1479: queuine tRNA-ribosyltransferase is similar to: | PaperBLAST |
ATGT_HALVD / Q9C4M3: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Haloferax volcanii | 28% id, 64% cov |
Q8THU2: tRNA-guanosine34 preQ1 transglycosylase (subunit 2/2) (EC 2.4.2.29); tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Methanosarcina acetivorans | 26% id, 66% cov |
ATGT_METJA / Q57878: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Methanocaldococcus jannaschii | 27% id, 51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3447717-3449216 (frame +3) on CP001978 is similar to: | PaperBLAST |
TYPH_HUMAN / P19971: Thymidine phosphorylase; TP; Gliostatin; Platelet-derived endothelial cell growth factor; PD-ECGF; TdRPase; EC 2.4.2.4 from Homo sapiens | 29% id, 28% cov |
Lawrence Berkeley National Laboratory