Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_1820: methionine gamma-lyase is similar to:	PaperBLAST
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	64% id, 98% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	40% id, 100% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	38% id, 100% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	38% id, 96% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	37% id, 97% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	39% id, 91% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	33% id, 96% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	32% id, 72% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	34% id, 63% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	33% id, 63% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	40% id, 50% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	38% id, 38% cov
More...

HP15_641: homocysteine synthase is similar to:	PaperBLAST
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	35% id, 97% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	31% id, 98% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	40% id, 56% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	40% id, 54% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	31% id, 69% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	38% id, 55% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	37% id, 55% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	36% id, 54% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	35% id, 54% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	35% id, 48% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	41% id, 39% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	40% id, 39% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	39% id, 40% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	40% id, 38% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	39% id, 39% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	38% id, 39% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	31% id, 33% cov
More...

HP15_2987: cysteine desulfurase, SufS subfamily is similar to:	PaperBLAST
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	26% id, 33% cov

HP15_1363: histidinol-phosphate aminotransferase is similar to:	PaperBLAST
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	50% id, 9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory