Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 6 curated entries in PaperBLAST's database that match '2.6.1.36' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3708: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

36% id,
96% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

27% id,
90% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

24% id,
94% cov

More...

HP15_3042: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
is similar to:
PaperBLAST

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

29% id,
91% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

27% id,
95% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

27% id,
95% cov

More...

HP15_3855: 2,4-diaminobutyrate 4-transaminase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

26% id,
92% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

24% id,
92% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

24% id,
89% cov

More...

HP15_2925: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

24% id,
96% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

21% id,
91% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

21% id,
91% cov

HP15_347: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

22% id,
62% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3914699-3916114 (frame -1) on CP001978
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis
Also see hits to annotated proteins above

36% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory