Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 15 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2678: shikimate kinase
is similar to:
PaperBLAST

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

33% id,
75% cov

IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens
Q5T6J7: gluconokinase (EC 2.7.1.12) from Homo sapiens

36% id,
43% cov

RR42_RS06130: Gluconokinase (EC 2.7.1.12) from Cupriavidus basilensis

62% id,
17% cov

HP15_479: shikimate kinase I
is similar to:
PaperBLAST

IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens
Q5T6J7: gluconokinase (EC 2.7.1.12) from Homo sapiens

29% id,
56% cov

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

42% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory