Curated BLAST for Genomes


Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 31 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3724: 1-phosphofructokinase
is similar to:

AO356_00950: Ribokinase (EC from Pseudomonas fluorescens

29% id,
96% cov

Pf1N1B4_6031: Ribokinase (EC from Pseudomonas fluorescens

25% id,
96% cov

AO353_20835: Ribokinase (EC from Pseudomonas fluorescens

24% id,
97% cov


HP15_3214: ribose-5-phosphate isomerase A
is similar to:

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC; EC from Fructilactobacillus sanfranciscensis

34% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory