Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_1597: carbohydrate kinase, FGGY
is similar to:
PaperBLAST

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

26% id,
62% cov

HP15_748: glycerol kinase
is similar to:
PaperBLAST

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

28% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1692492-1694207 (frame -3) on CP001978
is similar to:
PaperBLAST

Q9KBQ3: ribulokinase (EC 2.7.1.16) from Alkalihalobacillus halodurans

24% id,
94% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory