Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_1597: carbohydrate kinase, FGGY
is similar to:
PaperBLAST

mtlY / Q4KC52: xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

28% id,
100% cov

SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti

27% id,
99% cov

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

27% id,
97% cov

More...

HP15_2166: glycerol kinase
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

29% id,
95% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

26% id,
99% cov

HP15_748: glycerol kinase
is similar to:
PaperBLAST

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

25% id,
91% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

23% id,
92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory