Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 32 curated entries in PaperBLAST's database that match '2.7.1.71' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_479: shikimate kinase I
is similar to:
PaperBLAST

A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii

50% id,
93% cov

AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli
AroK / b3390: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli
aroK / P0A6D7: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli
P0A6D7: shikimate kinase (EC 2.7.1.71) from Escherichia coli

47% id,
99% cov

AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis
P9WPY3: shikimate kinase (EC 2.7.1.71) from Mycobacterium tuberculosis

41% id,
97% cov

More...

HP15_2678: shikimate kinase
is similar to:
PaperBLAST

AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis
P9WPY3: shikimate kinase (EC 2.7.1.71) from Mycobacterium tuberculosis

37% id,
94% cov

AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli
AroK / b3390: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli
aroK / P0A6D7: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli
P0A6D7: shikimate kinase (EC 2.7.1.71) from Escherichia coli

32% id,
99% cov

A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii

34% id,
93% cov

More...

HP15_3052: ATP-dependent protease La-like protein
is similar to:
PaperBLAST

A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii

27% id,
60% cov

AROL_ECOLI / P0A6E1: Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Escherichia coli
AroL / b0388: shikimate kinase 2 (EC 2.7.1.71) from Escherichia coli
aroL / P0A6E1: shikimate kinase 2 (EC 2.7.1.71) from Escherichia coli

54% id,
15% cov

HP15_480: 3-dehydroquinate synthase
is similar to:
PaperBLAST

ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans
aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans

37% id,
23% cov

ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae
ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae

50% id,
10% cov

ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae
ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae

33% id,
10% cov

HP15_3750: shikimate dehydrogenase
is similar to:
PaperBLAST

ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans
aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans

27% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory