Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 52 curated entries in PaperBLAST's database that match '2.7.1.8'.

These curated entries have 36 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2173: glucokinase
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

44% id,
97% cov

HP15_3724: 1-phosphofructokinase
is similar to:
PaperBLAST

PSUK_ECOLI / P30235: Pseudouridine kinase; EC 2.7.1.83 from Escherichia coli
PsuK / b2166: putative pseudouridine kinase (EC 2.7.1.83) from Escherichia coli
P30235: pseudouridine kinase (EC 2.7.1.83) from Escherichia coli

24% id,
74% cov

yeiC / Q1R9Q6: pseudouridine kinase (EC 2.7.1.83) from Escherichia coli

23% id,
68% cov

HP15_1060: inorganic polyphosphate/ATP-NAD kinase
is similar to:
PaperBLAST

POS5_YEAST / Q06892: NADH kinase POS5, mitochondrial; EC 2.7.1.86 from Saccharomyces cerevisiae
Q06892: NAD+ kinase (EC 2.7.1.23); NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

36% id,
46% cov

C7GJD6: NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

36% id,
46% cov

YEF1_YEAST / P32622: ATP-NADH kinase YEF1; EC 2.7.1.86 from Saccharomyces cerevisiae
P32622: NAD+ kinase (EC 2.7.1.23); NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

32% id,
48% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory