Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 16 curated entries in PaperBLAST's database that match '3.1.2.4'.

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3410: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

39% id,
99% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

39% id,
96% cov

PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

37% id,
98% cov

More...

HP15_909: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

39% id,
92% cov

PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

38% id,
92% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

39% id,
90% cov

More...

HP15_12: enoyl-CoA hydratase/isomerase
is similar to:
PaperBLAST

bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus
Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus

30% id,
70% cov

PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens

33% id,
56% cov

HIBCH_HUMAN / Q6NVY1: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Homo sapiens

30% id,
58% cov

More...

HP15_2541: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens

31% id,
68% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

29% id,
68% cov

RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis

29% id,
68% cov

More...

HP15_908: enoyl-CoA hydratase/isomerase
is similar to:
PaperBLAST

PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

28% id,
63% cov

PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens

28% id,
62% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

29% id,
57% cov

More...

HP15_2692: phenylacetate degradation probable enoyl-CoA hydratase paaB
is similar to:
PaperBLAST

bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus
Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus

23% id,
76% cov

HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana
Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Arabidopsis thaliana

28% id,
54% cov

HP15_4142: naphthoate synthase
is similar to:
PaperBLAST

PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens

30% id,
57% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

30% id,
53% cov

PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

35% id,
44% cov

More...

HP15_1740: enoyl-CoA hydratase/isomerase
is similar to:
PaperBLAST

bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus
Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus

32% id,
54% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

27% id,
61% cov

HIBCH_HUMAN / Q6NVY1: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Homo sapiens

29% id,
51% cov

More...

HP15_4094: enoyl-CoA hydratase/isomerase
is similar to:
PaperBLAST

PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens

30% id,
54% cov

HP15_55: enoyl-CoA hydratase/isomerase
is similar to:
PaperBLAST

HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana
Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Arabidopsis thaliana

25% id,
60% cov

HIBCH_YEAST / P28817: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; Mitochondrial small ribosomal subunit protein mS47; EC 3.1.2.4 from Saccharomyces cerevisiae

27% id,
38% cov

HP15_3941: fatty oxidation complex alpha subunit
is similar to:
PaperBLAST

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

30% id,
49% cov

HP15_4082: enoyl-CoA hydratase/isomerase
is similar to:
PaperBLAST

bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus
Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus

24% id,
57% cov

HP15_2575: enoyl-CoA hydratase/isomerase family protein carnitinyl-CoA
is similar to:
PaperBLAST

HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana
Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Arabidopsis thaliana

26% id,
52% cov

HP15_1737: enoyl-CoA hydratase/isomerase
is similar to:
PaperBLAST

bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus
Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus

30% id,
41% cov

HP15_1512: multifunctional fatty acid oxidation complex subunit alpha
is similar to:
PaperBLAST

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

27% id,
46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory