Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 319 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 250 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3832: hypothetical protein
is similar to:
PaperBLAST

Q8DR24: beta-galactosidase (EC 3.2.1.23) from Streptococcus pneumoniae

37% id,
99% cov

HP15_2171: uracil-DNA glycosylase superfamily
is similar to:
PaperBLAST

ABI35985.1: β-galactosidase (EC 3.2.1.23)

32% id,
17% cov

BGAL_THETH / O69315: Beta-galactosidase; Beta-gal; Lactase; EC 3.2.1.23 from Thermus thermophilus
BAA28362.1: β-galactosidase (A4-β-Gal) (EC 3.2.1.23)

32% id,
17% cov

BGAL1_THESP / Q8GEA9: Beta-galactosidase BgaA; Beta-gal; EC 3.2.1.23 from Thermus sp.
AAN05443.1: β-galactosidase (BgaA) (EC 3.2.1.23)

31% id,
14% cov

HP15_2036: Tol-Pal system, TolA
is similar to:
PaperBLAST

AAK74795.1: β-1,4-galactosidase A (BgaA;SP0648;SP_0648) (EC 3.2.1.23)
AAF97242.1: β-galactosidase (BgaA) (EC 3.2.1.23)

22% id,
5% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory