Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 46 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3411: ankyrin repeat protein
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

34% id,
24% cov

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

29% id,
21% cov

HP15_3838: ankyrin-like protein
is similar to:
PaperBLAST

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

30% id,
18% cov

HP15_1205: FOG: ankyrin repeat protein
is similar to:
PaperBLAST

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

44% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3583678-3584274 (frame -2) on CP001978
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus
Also see hits to annotated proteins above

34% id,
20% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory