Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 6 curated entries in PaperBLAST's database that match '3.5.1.30' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2074: carbon-nitrogen hydrolase family protein
is similar to:
PaperBLAST

AO353_07425: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

31% id,
95% cov

PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

31% id,
95% cov

B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida

30% id,
98% cov

More...

HP15_3653: acylamide amidohydrolase
is similar to:
PaperBLAST

Pf6N2E2_4777: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

29% id,
99% cov

Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

30% id,
94% cov

AO353_07425: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

30% id,
94% cov

More...

HP15_2449: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
is similar to:
PaperBLAST

Pf6N2E2_4777: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

31% id,
91% cov

B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida

30% id,
90% cov

AO356_14225: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

29% id,
91% cov

More...

HP15_882: hydrolase, carbon-nitrogen family protein
is similar to:
PaperBLAST

B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida

28% id,
98% cov

AO356_14225: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

28% id,
96% cov

Pf6N2E2_4777: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

28% id,
96% cov

More...

HP15_1723: hydrolase, carbon-nitrogen family protein
is similar to:
PaperBLAST

PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

26% id,
88% cov

AO356_14225: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

25% id,
89% cov

Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens

25% id,
91% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory