Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 18 curated entries in PaperBLAST's database that match '3.5.3.12' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2073: peptidyl-arginine deiminase family protein is similar to:	PaperBLAST
aguA / O24890: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori	44% id, 95% cov
Q9ZN18: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori	42% id, 95% cov
C8J_0892 / A0A5Y8XU16: agmatine deaminase (EC 3.5.3.12) from Campylobacter jejuni	37% id, 93% cov
Q0P9V0: agmatine deiminase (EC 3.5.3.12) from Campylobacter jejuni	36% id, 93% cov
S0F349: agmatine deiminase (EC 3.5.3.12) from Lactococcus cremoris	32% id, 92% cov
AGUA_ENTFA / Q837U5: Putative agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Enterococcus faecalis Q837U5: agmatine deiminase (EC 3.5.3.12) from Enterococcus faecalis	32% id, 92% cov
A0A0H2Z8C6: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa	31% id, 93% cov
Q5KR05: agmatine deiminase (EC 3.5.3.12) from Selenomonas ruminantium	31% id, 92% cov
AGUA_PSEAE / Q9I6J9: Agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Pseudomonas aeruginosa aguA / Q9I6J9: agmatine deiminase subunit (EC 3.5.3.12) from Pseudomonas aeruginosa Q9I6J9: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa	31% id, 92% cov
AO356_10030: Agmatine deiminase (EC 3.5.3.12) from Pseudomonas fluorescens	30% id, 93% cov
A0A0H3G8U9: agmatine deiminase (EC 3.5.3.12) from Listeria monocytogenes	29% id, 93% cov
AGUA_MEDTR / G7JT50: Agmatine deiminase; Agmatine iminohydrolase; MtAIH; EC 3.5.3.12 from Medicago truncatula	29% id, 93% cov
A0A0H2Z743: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa	30% id, 83% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2172991-2174244 (frame +1) on CP001978 is similar to:	PaperBLAST
aguA / O24890: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori Also see hits to annotated proteins above	44% id, 99% cov
Q9ZN18: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori Also see hits to annotated proteins above	42% id, 99% cov
C8J_0892 / A0A5Y8XU16: agmatine deaminase (EC 3.5.3.12) from Campylobacter jejuni Also see hits to annotated proteins above	37% id, 95% cov
Q0P9V0: agmatine deiminase (EC 3.5.3.12) from Campylobacter jejuni Also see hits to annotated proteins above	36% id, 95% cov
AGUA_ENTFA / Q837U5: Putative agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Enterococcus faecalis Q837U5: agmatine deiminase (EC 3.5.3.12) from Enterococcus faecalis Also see hits to annotated proteins above	32% id, 95% cov
S0F349: agmatine deiminase (EC 3.5.3.12) from Lactococcus cremoris Also see hits to annotated proteins above	32% id, 95% cov
A0A0H2Z8C6: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa Also see hits to annotated proteins above	31% id, 96% cov
Q5KR05: agmatine deiminase (EC 3.5.3.12) from Selenomonas ruminantium Also see hits to annotated proteins above	31% id, 95% cov
AGUA_PSEAE / Q9I6J9: Agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Pseudomonas aeruginosa aguA / Q9I6J9: agmatine deiminase subunit (EC 3.5.3.12) from Pseudomonas aeruginosa Q9I6J9: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa Also see hits to annotated proteins above	31% id, 95% cov
AO356_10030: Agmatine deiminase (EC 3.5.3.12) from Pseudomonas fluorescens Also see hits to annotated proteins above	31% id, 96% cov
AGUA_MEDTR / G7JT50: Agmatine deiminase; Agmatine iminohydrolase; MtAIH; EC 3.5.3.12 from Medicago truncatula Also see hits to annotated proteins above	29% id, 96% cov
A0A0H3G8U9: agmatine deiminase (EC 3.5.3.12) from Listeria monocytogenes Also see hits to annotated proteins above	29% id, 96% cov
A0A0H2Z743: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa Also see hits to annotated proteins above	30% id, 89% cov
More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory