Curated BLAST for Genomes


Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 56 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 40 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_272: biosynthetic arginine decarboxylase
is similar to:

Q7MK24: arginine decarboxylase (EC from Vibrio vulnificus

55% id,
97% cov

Q8ZHG8: arginine decarboxylase (EC from Yersinia pestis

56% id,
96% cov

SPEA_ECOLI / P21170: Biosynthetic arginine decarboxylase; ADC; EC from Escherichia coli
SpeA / b2938: arginine decarboxylase, biosynthetic (EC from Escherichia coli
speA / P21170: biosynthetic arginine decarboxylase (EC from Escherichia coli
P21170: arginine decarboxylase (EC from Escherichia coli

54% id,
96% cov


HP15_3785: ornithine decarboxylase
is similar to:

Q0PAC6: arginine decarboxylase (EC from Campylobacter jejuni

25% id,
53% cov

O25176: arginine decarboxylase (EC from Helicobacter pylori

22% id,
48% cov

HP15_247: diaminopimelate decarboxylase
is similar to:

ADC / P49726: arginine decarboxylase (EC from Solanum lycopersicum

23% id,
56% cov

A0A076IP90: arginine decarboxylase (EC from Phocaeicola dorei

24% id,
52% cov

Pf1N1B4_1296: Biosynthetic arginine decarboxylase (EC from Pseudomonas fluorescens

28% id,
42% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory