Curated BLAST for Genomes


Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 33 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_1362: chorismate mutase / prephenate dehydratase
is similar to:

CMPDT_PSEST / P27603: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC; EC from Pseudomonas stutzeri

65% id,
100% cov

Q8DUV6: prephenate dehydratase (EC from Streptococcus mutans

36% id,
99% cov

PHEA_METJA / Q58054: Prephenate dehydratase; PDT; MjPDT; EC from Methanocaldococcus jannaschii

34% id,
98% cov


HP15_3031: extracellular solute-binding protein, family 3
is similar to:

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC; EC from Pseudomonas aeruginosa

29% id,
60% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory