Searching in Marinobacter adhaerens HP15 (Marino)
Found 17 curated entries in PaperBLAST's database that match '4.2.1.82' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query
HP15_3363: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 34% id, 91% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 34% id, 91% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 31% id, 86% cov |
HP15_595: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
YAGF_ECOLI / P77596: D-xylonate dehydratase YagF; EC 4.2.1.82 from Escherichia coli | 31% id, 87% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 34% id, 53% cov |
XYLD_CAUVC / Q9A9Z2: D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides | 34% id, 53% cov |
HP15_2174: 6-phosphogluconate dehydratase is similar to: | PaperBLAST |
YJHG_ECOLI / P39358: D-xylonate dehydratase YjhG; EC 4.2.1.82 from Escherichia coli | 31% id, 72% cov |
YAGF_ECOLI / P77596: D-xylonate dehydratase YagF; EC 4.2.1.82 from Escherichia coli | 30% id, 70% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 28% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
614598-616451 (frame -3) on CP001978 is similar to: | PaperBLAST |
YAGF_ECOLI / P77596: D-xylonate dehydratase YagF; EC 4.2.1.82 from Escherichia coli | 30% id, 93% cov |
Lawrence Berkeley National Laboratory