Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 34 curated entries in PaperBLAST's database that match '4.3.1.3'.

These curated entries have 26 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2925: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

pbfA / A3UZK3: (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase (EC 4.3.1.33) from Vibrio splendidus

26% id,
87% cov

HP15_3855: 2,4-diaminobutyrate 4-transaminase
is similar to:
PaperBLAST

pbfA / A3UZK3: (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase (EC 4.3.1.33) from Vibrio splendidus

25% id,
85% cov

HP15_3042: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
is similar to:
PaperBLAST

pbfA / A3UZK3: (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase (EC 4.3.1.33) from Vibrio splendidus

33% id,
56% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory