Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 14 curated entries in PaperBLAST's database that match '5.1.1.4' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_922: proline racemase
is similar to:
PaperBLAST

M0LMI3: proline racemase (EC 5.1.1.4) from Haloarcula japonica

32% id,
96% cov

H3ZMH5: proline racemase (EC 5.1.1.4); 4-hydroxyproline epimerase (EC 5.1.1.8) from Thermococcus litoralis

29% id,
98% cov

PRAC_CLODI / A8DEZ8: Proline racemase; CdPRAC; EC 5.1.1.4 from Clostridioides difficile
Q17ZY4: proline racemase (EC 5.1.1.4) from Clostridioides difficile
A8DEZ8: proline racemase (EC 5.1.1.4) from Clostridioides difficile

29% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory