Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 103 curated entries in PaperBLAST's database that match '5.1.3.2'.

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3286: ribulose-phosphate 3-epimerase-like protein
is similar to:		 PaperBLAST

I3DTP3: ribulose-phosphate 3-epimerase (EC 5.1.3.1); L-ribulose-5-phosphate 3-epimerase (EC 5.1.3.22) from Bacillus methanolicus

 47% id,
99% cov

HP15_2048: UDP-glucose 4-epimerase
is similar to:		 PaperBLAST

GALE_LACHE / Q7WTB1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Lactobacillus helveticus

 45% id,
97% cov

GALE_STRTR / P21977: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Streptococcus thermophilus
galE / P21977: UDP-glucose-4-epimerase (EC 5.1.3.2) from Streptococcus thermophilus
P21977: UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus thermophilus

 42% id,
98% cov

A0A0H2UQY4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus pneumoniae

 40% id,
99% cov

More...

HP15_p187g66: UDP-glucose 4-epimerase
is similar to:		 PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 39% id,
98% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 33% id,
98% cov

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 33% id,
97% cov

More...

HP15_2399: polysaccharide biosynthesis protein CapD
is similar to:		 PaperBLAST

CAPD_RICPR / Q9ZDJ5: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Rickettsia prowazekii

 40% id,
89% cov

V5RBP5: UDP-glucose 4-epimerase (EC 5.1.3.2) from Acinetobacter baumannii

 42% id,
83% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 27% id,
59% cov

More...

HP15_2387: dTDP-glucose 4-6-dehydratase
is similar to:		 PaperBLAST

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 34% id,
98% cov

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 32% id,
98% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 32% id,
97% cov

More...

HP15_2382: UDP-N-acetylglucosamine 2-epimerase
is similar to:		 PaperBLAST

WBPI_PSEAE / G3XD61: UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; UDP-alpha-D-GlcNAc3NAcA 2-epimerase; UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-glucuronic acid 2-epimerase; EC 5.1.3.23 from Pseudomonas aeruginosa
wbpI / G3XD61: UDP-2,3-diacetamido-2,3-dideoxyglucuronic acid 2-epimerase (EC 5.1.3.23) from Pseudomonas aeruginosa

 33% id,
99% cov

HP15_p187g55: UDP-N-acetylglucosamine 2-epimerase
is similar to:		 PaperBLAST

WBPI_PSEAE / G3XD61: UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; UDP-alpha-D-GlcNAc3NAcA 2-epimerase; UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-glucuronic acid 2-epimerase; EC 5.1.3.23 from Pseudomonas aeruginosa
wbpI / G3XD61: UDP-2,3-diacetamido-2,3-dideoxyglucuronic acid 2-epimerase (EC 5.1.3.23) from Pseudomonas aeruginosa

 32% id,
100% cov

HP15_p187g47: dTDP-glucose 4,6-dehydratase
is similar to:		 PaperBLAST

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

 32% id,
99% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 30% id,
100% cov

F2NQX6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Marinithermus hydrothermalis

 29% id,
99% cov

More...

HP15_2023: UDP-glucuronic acid epimerase
is similar to:		 PaperBLAST

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 32% id,
99% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 30% id,
98% cov

F2NQX6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Marinithermus hydrothermalis

 30% id,
99% cov

More...

HP15_1900: dTDP-4-dehydrorhamnose 3,5-epimerase
is similar to:		 PaperBLAST

GERF_STRSQ / Q331R1: dTDP-4-dehydro-6-deoxyglucose 3-epimerase; dTDP-4-dehydro-6-deoxy-D-glucose 3-epimerase; dTDP-4-keto-6-deoxyglucose epimerase; dTDP-4-oxo-6-deoxy-D-glucose epimerase; EC 5.1.3.27 from Streptomyces sp.
gerF / Q331R1: dTDP-4-dehydro-6-deoxy-D-glucose 3-epimerase monomer (EC 5.1.3.27) from Streptomyces sp.
Q331R1: dTDP-4-dehydro-6-deoxy-D-glucose 3-epimerase (EC 5.1.3.27) from Streptomyces sp.

 40% id,
71% cov

CHMJ_STRBI / Q5SFD1: dTDP-4-dehydro-6-deoxyglucose 3-epimerase; dTDP-4-dehydro-6-deoxy-D-glucose 3-epimerase; dTDP-4-keto-6-deoxyglucose epimerase; dTDP-4-oxo-6-deoxy-D-glucose epimerase; EC 5.1.3.27 from Streptomyces bikiniensis

 39% id,
65% cov

HP15_2386: UDP-glucose 4-epimerase
is similar to:		 PaperBLAST

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 30% id,
93% cov

GALE_ECOLI / P09147: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Escherichia coli
GalD / b0759: UDP-glucose 4-epimerase (EC 5.1.3.2) from Escherichia coli
galE / P09147: UDP-glucose 4-epimerase (EC 5.1.3.2) from Escherichia coli

 30% id,
64% cov

A0A0H2UQY4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus pneumoniae

 28% id,
57% cov

HP15_1899: UDP-Glucose 4-empimerase
is similar to:		 PaperBLAST

GALE_LACHE / Q7WTB1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Lactobacillus helveticus

 28% id,
100% cov

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

 28% id,
87% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 29% id,
86% cov

More...

HP15_2383: nucleotide sugar epimerase/dehydratase
is similar to:		 PaperBLAST

V5RBP5: UDP-glucose 4-epimerase (EC 5.1.3.2) from Acinetobacter baumannii

 35% id,
77% cov

CAPD_RICPR / Q9ZDJ5: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Rickettsia prowazekii

 31% id,
79% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 21% id,
92% cov

HP15_1503: nucleoside-diphosphate sugar epimerase
is similar to:		 PaperBLAST

galE / P55180: UDP-glucose 4-epimerase (EC 5.1.3.7; EC 5.1.3.2) from Bacillus subtilis

 30% id,
48% cov

HP15_1889: NAD-dependent epimerase/dehydratase
is similar to:		 PaperBLAST

GNU_ECO57 / Q8X7P7: N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase; GlcNAc-P-P-Und 4-epimerase; EC 5.1.3.26 from Escherichia coli
gnu / Q8X7P7: N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase (EC 5.1.3.26) from Escherichia coli

 24% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory