Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 102 curated entries in PaperBLAST's database that match '5.1.3.2'.

These curated entries have 62 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_2048: UDP-glucose 4-epimerase
is similar to:
PaperBLAST

GALE_LACHE / Q7WTB1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Lactobacillus helveticus

45% id,
97% cov

GALE_STRTR / P21977: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Streptococcus thermophilus
galE / P21977: UDP-glucose-4-epimerase (EC 5.1.3.2) from Streptococcus thermophilus
P21977: UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus thermophilus

42% id,
98% cov

A0A0H2UQY4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus pneumoniae

40% id,
99% cov

More...

HP15_p187g66: UDP-glucose 4-epimerase
is similar to:
PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

39% id,
98% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

33% id,
98% cov

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

33% id,
97% cov

More...

HP15_2399: polysaccharide biosynthesis protein CapD
is similar to:
PaperBLAST

CAPD_RICPR / Q9ZDJ5: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Rickettsia prowazekii

40% id,
89% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

27% id,
59% cov

GALE_LACHE / Q7WTB1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Lactobacillus helveticus

29% id,
42% cov

More...

HP15_2387: dTDP-glucose 4-6-dehydratase
is similar to:
PaperBLAST

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

34% id,
98% cov

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

32% id,
98% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

32% id,
97% cov

More...

HP15_2382: UDP-N-acetylglucosamine 2-epimerase
is similar to:
PaperBLAST

WBPI_PSEAE / G3XD61: UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; UDP-alpha-D-GlcNAc3NAcA 2-epimerase; UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-glucuronic acid 2-epimerase; EC 5.1.3.23 from Pseudomonas aeruginosa
wbpI / G3XD61: UDP-2,3-diacetamido-2,3-dideoxyglucuronic acid 2-epimerase (EC 5.1.3.23) from Pseudomonas aeruginosa

33% id,
99% cov

HP15_p187g55: UDP-N-acetylglucosamine 2-epimerase
is similar to:
PaperBLAST

WBPI_PSEAE / G3XD61: UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; UDP-alpha-D-GlcNAc3NAcA 2-epimerase; UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-glucuronic acid 2-epimerase; EC 5.1.3.23 from Pseudomonas aeruginosa
wbpI / G3XD61: UDP-2,3-diacetamido-2,3-dideoxyglucuronic acid 2-epimerase (EC 5.1.3.23) from Pseudomonas aeruginosa

32% id,
100% cov

HP15_p187g47: dTDP-glucose 4,6-dehydratase
is similar to:
PaperBLAST

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

32% id,
99% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

30% id,
100% cov

F2NQX6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Marinithermus hydrothermalis

29% id,
99% cov

More...

HP15_2023: UDP-glucuronic acid epimerase
is similar to:
PaperBLAST

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

32% id,
99% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

30% id,
98% cov

F2NQX6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Marinithermus hydrothermalis

30% id,
99% cov

More...

HP15_1900: dTDP-4-dehydrorhamnose 3,5-epimerase
is similar to:
PaperBLAST

GERF_STRSQ / Q331R1: dTDP-4-dehydro-6-deoxyglucose 3-epimerase; dTDP-4-dehydro-6-deoxy-D-glucose 3-epimerase; dTDP-4-keto-6-deoxyglucose epimerase; dTDP-4-oxo-6-deoxy-D-glucose epimerase; EC 5.1.3.27 from Streptomyces sp.
gerF / Q331R1: dTDP-4-dehydro-6-deoxy-D-glucose 3-epimerase monomer (EC 5.1.3.27) from Streptomyces sp.
Q331R1: dTDP-4-dehydro-6-deoxy-D-glucose 3-epimerase (EC 5.1.3.27) from Streptomyces sp.

40% id,
71% cov

CHMJ_STRBI / Q5SFD1: dTDP-4-dehydro-6-deoxyglucose 3-epimerase; dTDP-4-dehydro-6-deoxy-D-glucose 3-epimerase; dTDP-4-keto-6-deoxyglucose epimerase; dTDP-4-oxo-6-deoxy-D-glucose epimerase; EC 5.1.3.27 from Streptomyces bikiniensis

39% id,
65% cov

HP15_2386: UDP-glucose 4-epimerase
is similar to:
PaperBLAST

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

30% id,
93% cov

GALE_ECOLI / P09147: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Escherichia coli
GalD / b0759: UDP-glucose 4-epimerase (EC 5.1.3.2) from Escherichia coli
galE / P09147: UDP-glucose 4-epimerase (EC 5.1.3.2) from Escherichia coli
P09147: UDP-glucose 4-epimerase (EC 5.1.3.2) from Escherichia coli

30% id,
64% cov

A0A0H2UQY4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus pneumoniae

28% id,
57% cov

HP15_1899: UDP-Glucose 4-empimerase
is similar to:
PaperBLAST

GALE_LACHE / Q7WTB1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Lactobacillus helveticus

28% id,
100% cov

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

28% id,
87% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

29% id,
86% cov

More...

HP15_2383: nucleotide sugar epimerase/dehydratase
is similar to:
PaperBLAST

CAPD_RICPR / Q9ZDJ5: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Rickettsia prowazekii

31% id,
79% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

21% id,
92% cov

HP15_1503: nucleoside-diphosphate sugar epimerase
is similar to:
PaperBLAST

galE / P55180: UDP-glucose 4-epimerase (EC 5.1.3.7; EC 5.1.3.2) from Bacillus subtilis

30% id,
48% cov

HP15_1889: NAD-dependent epimerase/dehydratase
is similar to:
PaperBLAST

GNU_ECO57 / Q8X7P7: N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase; GlcNAc-P-P-Und 4-epimerase; EC 5.1.3.26 from Escherichia coli
gnu / Q8X7P7: N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase (EC 5.1.3.26) from Escherichia coli

24% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory