Curated BLAST
Searching in Marinobacter adhaerens HP15 (Marino)
Found 15 curated entries in PaperBLAST's database that match '5.1.3.4' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Marinobacter adhaerens HP15, or try another query
HP15_1260: sugar aldolase is similar to: | PaperBLAST |
CA265_RS08620: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Pedobacter sp. | 25% id, 88% cov |
ARAD_ECOLI / P08203: L-ribulose-5-phosphate 4-epimerase AraD; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli AraD / b0061: L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli araD / GB|BAB96630.1: L-ribulose-5-phosphate 4-epimerase; EC 5.1.3.4 from Escherichia coli araD / P08203: L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli | 27% id, 79% cov |
SGBE_ECOLI / P37680: L-ribulose-5-phosphate 4-epimerase SgbE; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli YiaS / b3583: L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli sgbE / P37680: L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli | 29% id, 73% cov |
ULAF_ECOLI / P39306: L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli YjfX / b4198: L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli ulaF / P39306: L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli | 26% id, 79% cov |
ARAD_BACSU / P94525: L-ribulose-5-phosphate 4-epimerase; Phosphoribulose isomerase; EC 5.1.3.4 from Bacillus subtilis | 26% id, 69% cov |
Shewana3_2065: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Shewanella sp. | 35% id, 35% cov |
Echvi_0503: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Echinicola vietnamensis | 32% id, 32% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory