Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 14 curated entries in PaperBLAST's database that match '6.3.1.11'.

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_942: glutamate-putrescine ligase
is similar to:
PaperBLAST

Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

65% id,
100% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

64% id,
100% cov

AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

65% id,
98% cov

More...

HP15_3156: glutamate-ammonia ligase
is similar to:
PaperBLAST

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei

30% id,
100% cov

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

30% id,
93% cov

HP15_428: glutamine synthetase, type I
is similar to:
PaperBLAST

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

27% id,
97% cov

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei

32% id,
73% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

32% id,
63% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory