Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_531: acetolactate synthase, large subunit, biosynthetic type
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

50% id,
95% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

45% id,
93% cov

HP15_1017: acetolactate synthase, large subunit, biosynthetic type
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

44% id,
97% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

41% id,
93% cov

HP15_3118: acetolactate synthase, large subunit, biosynthetic type
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

29% id,
95% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

30% id,
89% cov

HP15_953: protein containing thiamine pyrophosphate enzyme, C-terminal TPP-binding / Thiamine pyrophosphate enzyme, N-terminal TPP binding region
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

25% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory