Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter adhaerens HP15 (Marino)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Marinobacter adhaerens HP15, or try another query

HP15_3289: para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

62% id,
95% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

57% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

46% id,
99% cov

HP15_3078: carbamoyl-phosphate synthase small chain
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

31% id,
84% cov

HP15_2050: bifunctional GMP synthase/glutamine amidotransferase protein
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

26% id,
94% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

25% id,
95% cov

HP15_898: glutamine amidotransferase class-I
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

30% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory