Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 56 curated entries in PaperBLAST's database that match '1.1.1.23'.

These curated entries have 42 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2814: histidinol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis

45% id,
98% cov

HISX_MYCTU / P9WNW9: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Mycobacterium tuberculosis
P9WNW9: histidinol dehydrogenase (EC 1.1.1.23) from Mycobacterium tuberculosis

44% id,
95% cov

HISX_SALTY / P10370: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium

40% id,
97% cov

More...

DvMF_3100: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

DHB8_HUMAN / Q92506: (3R)-3-hydroxyacyl-CoA dehydrogenase; 17-beta-hydroxysteroid dehydrogenase 8; 17-beta-HSD 8; HSD17B8; 3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit; KAR alpha subunit; 3-oxoacyl-[acyl-carrier-protein] reductase; Estradiol 17-beta-dehydrogenase 8; Protein Ke6; Ke6; Short chain dehydrogenase/reductase family 30C member 1; Testosterone 17-beta-dehydrogenase 8; EC 1.1.1.n12; EC 1.1.1.62; EC 1.1.1.239 from Homo sapiens

43% id,
96% cov

DHB8_MOUSE / P50171: (3R)-3-hydroxyacyl-CoA dehydrogenase; 17-beta-hydroxysteroid dehydrogenase 8; 17-beta-HSD 8; 3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit; KAR alpha subunit; 3-oxoacyl-[acyl-carrier-protein] reductase; Estradiol 17-beta-dehydrogenase 8; Protein Ke6; Ke-6; Testosterone 17-beta-dehydrogenase 8; EC 1.1.1.n12; EC 1.1.1.62; EC 1.1.1.239 from Mus musculus

40% id,
97% cov

DHB8_RAT / Q6MGB5: (3R)-3-hydroxyacyl-CoA dehydrogenase; 17-beta-hydroxysteroid dehydrogenase 8; 17-beta-HSD 8; 3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit; KAR alpha subunit; 3-oxoacyl-[acyl-carrier-protein] reductase; Estradiol 17-beta-dehydrogenase 8; Testosterone 17-beta-dehydrogenase 8; EC 1.1.1.n12; EC 1.1.1.62; EC 1.1.1.239 from Rattus norvegicus

40% id,
97% cov

More...

DvMF_2858: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

DHB8_MOUSE / P50171: (3R)-3-hydroxyacyl-CoA dehydrogenase; 17-beta-hydroxysteroid dehydrogenase 8; 17-beta-HSD 8; 3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit; KAR alpha subunit; 3-oxoacyl-[acyl-carrier-protein] reductase; Estradiol 17-beta-dehydrogenase 8; Protein Ke6; Ke-6; Testosterone 17-beta-dehydrogenase 8; EC 1.1.1.n12; EC 1.1.1.62; EC 1.1.1.239 from Mus musculus

36% id,
95% cov

DHB8_RAT / Q6MGB5: (3R)-3-hydroxyacyl-CoA dehydrogenase; 17-beta-hydroxysteroid dehydrogenase 8; 17-beta-HSD 8; 3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit; KAR alpha subunit; 3-oxoacyl-[acyl-carrier-protein] reductase; Estradiol 17-beta-dehydrogenase 8; Testosterone 17-beta-dehydrogenase 8; EC 1.1.1.n12; EC 1.1.1.62; EC 1.1.1.239 from Rattus norvegicus

36% id,
95% cov

DHB8_HUMAN / Q92506: (3R)-3-hydroxyacyl-CoA dehydrogenase; 17-beta-hydroxysteroid dehydrogenase 8; 17-beta-HSD 8; HSD17B8; 3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit; KAR alpha subunit; 3-oxoacyl-[acyl-carrier-protein] reductase; Estradiol 17-beta-dehydrogenase 8; Protein Ke6; Ke6; Short chain dehydrogenase/reductase family 30C member 1; Testosterone 17-beta-dehydrogenase 8; EC 1.1.1.n12; EC 1.1.1.62; EC 1.1.1.239 from Homo sapiens

36% id,
94% cov

More...

DvMF_1902: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq)
is similar to:
PaperBLAST

A0A0A7RFJ3: hydroxyphenylpyruvate reductase (EC 1.1.1.237) from Salvia miltiorrhiza

34% id,
90% cov

HPPR_PLESU / Q65CJ7: Hydroxyphenylpyruvate reductase; HPPR; EC 1.1.1.237 from Plectranthus scutellarioides
HPPR / Q65CJ7: hydroxyphenylpyruvate reductase (EC 1.1.1.237) from Plectranthus scutellarioides
Q65CJ7: hydroxyphenylpyruvate reductase (EC 1.1.1.237) from Plectranthus scutellarioides

34% id,
90% cov

Q9CA90: hydroxyphenylpyruvate reductase (EC 1.1.1.237); glyoxylate reductase (NADP+) (EC 1.1.1.79); hydroxypyruvate reductase (EC 1.1.1.81) from Arabidopsis thaliana

36% id,
83% cov

More...

DvMF_2444: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

DHB8_HUMAN / Q92506: (3R)-3-hydroxyacyl-CoA dehydrogenase; 17-beta-hydroxysteroid dehydrogenase 8; 17-beta-HSD 8; HSD17B8; 3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit; KAR alpha subunit; 3-oxoacyl-[acyl-carrier-protein] reductase; Estradiol 17-beta-dehydrogenase 8; Protein Ke6; Ke6; Short chain dehydrogenase/reductase family 30C member 1; Testosterone 17-beta-dehydrogenase 8; EC 1.1.1.n12; EC 1.1.1.62; EC 1.1.1.239 from Homo sapiens

31% id,
96% cov

P22441: N-acylmannosamine 1-dehydrogenase (EC 1.1.1.233) from Flavobacterium sp.

32% id,
93% cov

DHB8_MOUSE / P50171: (3R)-3-hydroxyacyl-CoA dehydrogenase; 17-beta-hydroxysteroid dehydrogenase 8; 17-beta-HSD 8; 3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit; KAR alpha subunit; 3-oxoacyl-[acyl-carrier-protein] reductase; Estradiol 17-beta-dehydrogenase 8; Protein Ke6; Ke-6; Testosterone 17-beta-dehydrogenase 8; EC 1.1.1.n12; EC 1.1.1.62; EC 1.1.1.239 from Mus musculus

30% id,
97% cov

More...

DvMF_0209: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq)
is similar to:
PaperBLAST

Q9CA90: hydroxyphenylpyruvate reductase (EC 1.1.1.237); glyoxylate reductase (NADP+) (EC 1.1.1.79); hydroxypyruvate reductase (EC 1.1.1.81) from Arabidopsis thaliana

31% id,
85% cov

DvMF_2816: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

A0A6B7HD48: tropinone reductase II (EC 1.1.1.236) from Przewalskia tangutica

24% id,
97% cov

B2L2W9: tropinone reductase II (EC 1.1.1.236) from Anisodus acutangulus

24% id,
97% cov

DvMF_2079: NmrA family protein (RefSeq)
is similar to:
PaperBLAST

C5YGL7: flavanone 4-reductase (EC 1.1.1.234) from Sorghum bicolor

29% id,
40% cov

DFR / A5Z0G1: dihydroflavonol-4-reductase/flavanone 4-reductase (EC 1.1.1.234; EC 1.1.1.219) from Saussurea medusa

37% id,
24% cov

DFRA_PYRCO / Q84KP0: Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase; Dihydroflavonol 4-reductase; DFR; Flavanone 4-reductase; FNR; EC 1.1.1.219; EC 1.1.1.234 from Pyrus communis

37% id,
24% cov

More...

DvMF_2656: Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq)
is similar to:
PaperBLAST

P22441: N-acylmannosamine 1-dehydrogenase (EC 1.1.1.233) from Flavobacterium sp.

40% id,
20% cov

DvMF_1964: phosphoribosyl-AMP cyclohydrolase (RefSeq)
is similar to:
PaperBLAST

A1BPP9: histidinol dehydrogenase (EC 1.1.1.23) from Geotrichum candidum

34% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory