Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 9 curated entries in PaperBLAST's database that match '1.1.1.23' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2814: histidinol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis

45% id,
98% cov

HISX_MYCTU / P9WNW9: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Mycobacterium tuberculosis

44% id,
95% cov

HISX_SALTY / P10370: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium

40% id,
97% cov

More...

DvMF_1964: phosphoribosyl-AMP cyclohydrolase (RefSeq)
is similar to:
PaperBLAST

A1BPP9: histidinol dehydrogenase (EC 1.1.1.23) from Geotrichum candidum

34% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory