Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 5 curated entries in PaperBLAST's database that match '1.1.1.401' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
| DvMF_3100: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 39% id, 94% cov |
| DvMF_2444: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 30% id, 96% cov |
| DvMF_2858: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 30% id, 95% cov |
| DvMF_1170: Alcohol dehydrogenase zinc-binding domain protein (RefSeq) is similar to: | PaperBLAST |
KDRDH_SULTA / P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; EC 1.1.1.401 from Sulfobacillus thermosulfidooxidans | 26% id, 70% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory