Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.86'.

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0155: ketol-acid reductoisomerase (RefSeq)
is similar to:
PaperBLAST

D3PT81: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Meiothermus ruber

66% id,
98% cov

ILVC_ALIAD / C8WR67: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Alicyclobacillus acidocaldarius
C8WR67: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Alicyclobacillus acidocaldarius

67% id,
95% cov

Q9Z565: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor
D6ERQ9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans

62% id,
99% cov

More...

DvMF_2077: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq)
is similar to:
PaperBLAST

ILVC_PSEAE / Q9HVA2: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Pseudomonas aeruginosa

38% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory