Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 42 curated entries in PaperBLAST's database that match '1.1.99.2'.

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_1315: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:		 PaperBLAST

A0A024TMA3: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces invadans

 29% id,
92% cov

W4G0G7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces astaci

 30% id,
86% cov

A0A067BRK4: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia parasitica

 27% id,
93% cov

More...

DvMF_2322: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq)
is similar to:		 PaperBLAST

A0A024TMA3: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces invadans

 29% id,
92% cov

W4G0G7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces astaci

 30% id,
82% cov

HOT_MOUSE / Q8R0N6: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Mus musculus

 29% id,
84% cov

More...

DvMF_0321: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:		 PaperBLAST

HOT_RAT / Q4QQW3: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Rattus norvegicus

 29% id,
87% cov

HOT_MOUSE / Q8R0N6: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Mus musculus

 29% id,
88% cov

A0A067BRK4: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia parasitica

 27% id,
93% cov

More...

DvMF_0330: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:		 PaperBLAST

W4G0G7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces astaci

 27% id,
93% cov

T0Q1Z2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia diclina

 26% id,
94% cov

A0A067BRK4: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia parasitica

 26% id,
94% cov

More...

DvMF_0990: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:		 PaperBLAST

HOT_HUMAN / Q8IWW8: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; Fe-containing alcohol dehydrogenase; EC 1.1.99.24 from Homo sapiens
Q8IWW8: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Homo sapiens

 28% id,
87% cov

A0A0L0DHP5: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Thecamonas trahens

 27% id,
91% cov

HOT_RAT / Q4QQW3: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Rattus norvegicus

 28% id,
85% cov

More...

DvMF_1890: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:		 PaperBLAST

HOT_MOUSE / Q8R0N6: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Mus musculus

 26% id,
62% cov

HOT_HUMAN / Q8IWW8: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; Fe-containing alcohol dehydrogenase; EC 1.1.99.24 from Homo sapiens
Q8IWW8: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Homo sapiens

 27% id,
55% cov

S5YSM1: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Bemisia tabaci

 26% id,
54% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory