Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.

These curated entries have 126 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

40503-41495 (frame -2) on 254340
is similar to:
PaperBLAST

NCED4_ORYSJ / Q69NX5: 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic; OsNCED4; EC 1.13.11.51 from Oryza sativa

26% id,
19% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory