Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 321 curated entries in PaperBLAST's database that match '1.14.13.2'.

These curated entries have 193 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0327: oxidoreductase FAD/NAD(P)-binding domain protein (RefSeq)
is similar to:
PaperBLAST

Q08KE1: propane 2-monooxygenase (subunit 3/4) (EC 1.14.13.227); alkane 1-monooxygenase (subunit 3/4) (EC 1.14.15.3) from Pseudonocardia sp.

32% id,
65% cov

DvMF_3009: oxidoreductase FAD/NAD(P)-binding domain protein (RefSeq)
is similar to:
PaperBLAST

GBMOR_CHRSD / Q1QYU6: Glycine betaine monooxygenase reductase subunit; BMO reductase subunit; GB monooxygenase reductase subunit; BMO NADH-dependent flavine reductase component; EC 1.14.13.251 from Chromohalobacter salexigens

27% id,
65% cov

GBMOR_PSEAB / A0A0H2ZJB2: Glycine betaine monooxygenase reductase subunit; Glycine betaine catabolism B; EC 1.14.13.251 from Pseudomonas aeruginosa
GBMOR_PSEAE / Q9HTF3: Glycine betaine monooxygenase reductase subunit; Glycine betaine catabolism B; EC 1.14.13.251 from Pseudomonas aeruginosa
gbcB / Q9HTF3: glycine betaine monooxygenase ferredoxin reductase subunit (EC 1.14.13.251) from Pseudomonas aeruginosa

29% id,
56% cov

bmoC / Q8KQE6: soluble butane monooxygenase reductase component (EC 1.14.13.230) from Thauera butanivorans
Q8KQE6: butane monooxygenase (soluble) (subunit 2/5) (EC 1.14.13.230) from Thauera butanivorans

25% id,
62% cov

DvMF_0938: putative oxidoreductase (RefSeq)
is similar to:
PaperBLAST

AHBM_STRCM / A0A0K2JKU1: 3-amino-4-hydroxybenzoate 2-monooxygenase; EC 1.14.13.249 from Streptomyces cremeus
creL / A0A0K2JKU1: 3-amino-4-hydroxybenzoate 2-monooxygenase (EC 1.14.13.249) from Streptomyces cremeus
A0A0K2JKU1: 3-amino-4-hydroxybenzoate 2-monooxygenase (EC 1.14.13.249) from Streptomyces cremeus

30% id,
44% cov

GSOX2_ARATH / Q94K43: Flavin-containing monooxygenase FMO GS-OX2; Flavin-monooxygenase glucosinolate S-oxygenase 2; EC 1.14.13.237 from Arabidopsis thaliana
GS-OX2 / Q94K43: glucosinolate S-oxygenase 2 (EC 1.14.13.237) from Arabidopsis thaliana
Q94K43: aliphatic glucosinolate S-oxygenase (EC 1.14.13.237) from Arabidopsis thaliana

37% id,
17% cov

GSOX3_ARATH / Q9SXE1: Flavin-containing monooxygenase FMO GS-OX3; Flavin-monooxygenase glucosinolate S-oxygenase 3; EC 1.14.13.237 from Arabidopsis thaliana
GS-OX3 / Q9SXE1: glucosinolate S-oxygenase 3 (EC 1.14.13.237) from Arabidopsis thaliana
Q9SXE1: aliphatic glucosinolate S-oxygenase (EC 1.14.13.237) from Arabidopsis thaliana

44% id,
10% cov

DvMF_1148: TrkA-N domain protein (RefSeq)
is similar to:
PaperBLAST

I6YQD0: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Enterobacteriaceae bacterium

28% id,
34% cov

TETX_BACT4 / Q93L51: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; TetX2; EC 1.14.13.231 from Bacteroides thetaiotaomicron
Q93L51: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides thetaiotaomicron
A0A077XNF8: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Sphingobacterium sp.

28% id,
34% cov

TETX_BACFG / Q01911: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; Tetracycline resistance protein from transposon Tn4351/Tn4400; EC 1.14.13.231 from Bacteroides fragilis
TETX_SPHSM / Q06DK7: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; Tetracycline resistance protein; EC 1.14.13.231 from Sphingobacterium sp.
tetX / Q01911: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides fragilis
Q01911: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides fragilis

28% id,
34% cov

More...

DvMF_2672: 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq)
is similar to:
PaperBLAST

BOXA_AROEV / Q9AIX6: Benzoyl-CoA oxygenase component A; Benzoyl-CoA 2,3-dioxygenase subunit A; Benzoyl-CoA dioxygenase reductase component; EC 1.14.13.208 from Aromatoleum evansii
Q9AIX6: benzoyl-CoA 2,3-epoxidase (subunit 2/2) (EC 1.14.13.208) from Aromatoleum evansii

30% id,
29% cov

DvMF_2389: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq)
is similar to:
PaperBLAST

AHBM2_STRPT / E2CYT2: 3-amino-4-hydroxybenzoate 2-monooxygenase PtnB3; EC 1.14.13.249 from Streptomyces platensis
E2CYT2: 3-amino-4-hydroxybenzoate 2-monooxygenase (EC 1.14.13.249) from Streptomyces platensis

30% id,
29% cov

AHBM_STRCM / A0A0K2JKU1: 3-amino-4-hydroxybenzoate 2-monooxygenase; EC 1.14.13.249 from Streptomyces cremeus
creL / A0A0K2JKU1: 3-amino-4-hydroxybenzoate 2-monooxygenase (EC 1.14.13.249) from Streptomyces cremeus
A0A0K2JKU1: 3-amino-4-hydroxybenzoate 2-monooxygenase (EC 1.14.13.249) from Streptomyces cremeus

37% id,
18% cov

GSOX1_ARATH / Q9SS04: Flavin-containing monooxygenase FMO GS-OX1; Flavin-monooxygenase glucosinolate S-oxygenase 1; Putative flavin-containing monooxygenase 3; EC 1.14.13.237 from Arabidopsis thaliana
GS-OX1 / Q9SS04: glucosinolate S-oxygenase 1 (EC 1.14.13.237) from Arabidopsis thaliana
Q9SS04: aliphatic glucosinolate S-oxygenase (EC 1.14.13.237) from Arabidopsis thaliana

33% id,
17% cov

More...

DvMF_0898: pyridine nucleotide-disulphide oxidoreductase dimerisation region (RefSeq)
is similar to:
PaperBLAST

OXYE_STRRM / Q3S8R0: 6-methylpretetramide 4-monooxygenase; EC 1.14.13.232 from Streptomyces rimosus
oxyE / L8EVI4: 6-methylpretetramide 4-monooxygenase (EC 1.14.13.232) from Streptomyces rimosus
Q3S8R0: 6-methylpretetramide 4-monooxygenase (EC 1.14.13.232) from Streptomyces rimosus

46% id,
13% cov

GSOX2_ARATH / Q94K43: Flavin-containing monooxygenase FMO GS-OX2; Flavin-monooxygenase glucosinolate S-oxygenase 2; EC 1.14.13.237 from Arabidopsis thaliana
GS-OX2 / Q94K43: glucosinolate S-oxygenase 2 (EC 1.14.13.237) from Arabidopsis thaliana
Q94K43: aliphatic glucosinolate S-oxygenase (EC 1.14.13.237) from Arabidopsis thaliana

48% id,
10% cov

GSOX4_ARATH / Q93Y23: Flavin-containing monooxygenase FMO GS-OX4; Flavin-monooxygenase glucosinolate S-oxygenase 4; EC 1.14.13.237 from Arabidopsis thaliana
GS-OX4 / Q93Y23: glucosinolate S-oxygenase 4 (EC 1.14.13.237) from Arabidopsis thaliana
Q93Y23: aliphatic glucosinolate S-oxygenase (EC 1.14.13.237) from Arabidopsis thaliana

46% id,
10% cov

DvMF_0401: Thioredoxin-disulfide reductase (RefSeq)
is similar to:
PaperBLAST

OXYE_STRRM / Q3S8R0: 6-methylpretetramide 4-monooxygenase; EC 1.14.13.232 from Streptomyces rimosus
oxyE / L8EVI4: 6-methylpretetramide 4-monooxygenase (EC 1.14.13.232) from Streptomyces rimosus
Q3S8R0: 6-methylpretetramide 4-monooxygenase (EC 1.14.13.232) from Streptomyces rimosus

47% id,
13% cov

DvMF_0543: sodium/hydrogen exchanger (RefSeq)
is similar to:
PaperBLAST

I6YQD0: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Enterobacteriaceae bacterium

35% id,
14% cov

TETX_BACT4 / Q93L51: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; TetX2; EC 1.14.13.231 from Bacteroides thetaiotaomicron
Q93L51: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides thetaiotaomicron
A0A077XNF8: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Sphingobacterium sp.

35% id,
14% cov

TETX_BACFG / Q01911: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; Tetracycline resistance protein from transposon Tn4351/Tn4400; EC 1.14.13.231 from Bacteroides fragilis
TETX_SPHSM / Q06DK7: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; Tetracycline resistance protein; EC 1.14.13.231 from Sphingobacterium sp.
tetX / Q01911: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides fragilis
Q01911: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides fragilis

35% id,
14% cov

DvMF_2077: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq)
is similar to:
PaperBLAST

tmuM / I7ASS7: trimethyluric acid monooxygenase (EC 1.14.13.212) from Pseudomonas sp.
I7ASS7: 1,3,7-trimethyluric acid 5-monooxygenase (EC 1.14.13.212) from Pseudomonas sp.

43% id,
11% cov

tfdBI / P27138: 2,4-dichlorophenol 6-monooxygenase I (EC 1.14.13.7; EC 1.14.13.20) from Cupriavidus pinatubonensis

44% id,
6% cov

MICAL_DROME / Q86BA1: [F-actin]-monooxygenase Mical; Molecule interacting with CasL protein homolog; EC 1.14.13.225 from Drosophila melanogaster
Q86BA1: F-actin monooxygenase (EC 1.14.13.225) from Drosophila melanogaster

28% id,
3% cov

DvMF_0446: putative glutamate synthase subunit beta (RefSeq)
is similar to:
PaperBLAST

TSDB_RHOJR / Q0SFL5: Probable NADH-specific resorcinol 4-hydroxylase; EC 1.14.13.220 from Rhodococcus jostii
tsdB / Q0SFL5: resorcinol 4-hydroxylase (NADH) (EC 1.14.13.220) from Rhodococcus jostii

31% id,
15% cov

DvMF_0324: 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq)
is similar to:
PaperBLAST

GSOX2_ARATH / Q94K43: Flavin-containing monooxygenase FMO GS-OX2; Flavin-monooxygenase glucosinolate S-oxygenase 2; EC 1.14.13.237 from Arabidopsis thaliana
GS-OX2 / Q94K43: glucosinolate S-oxygenase 2 (EC 1.14.13.237) from Arabidopsis thaliana
Q94K43: aliphatic glucosinolate S-oxygenase (EC 1.14.13.237) from Arabidopsis thaliana

45% id,
8% cov

DvMF_2634: FAD dependent oxidoreductase (RefSeq)
is similar to:
PaperBLAST

MOBA_COMTE / Q6SSJ6: 3-hydroxybenzoate 4-monooxygenase; 3-hydroxybenzoate 4-hydroxylase; M-hydroxybenzoate hydroxylase; EC 1.14.13.23 from Comamonas testosteroni
Q6SSJ6: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2); 3-hydroxybenzoate 4-monooxygenase (EC 1.14.13.23) from Comamonas testosteroni

47% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

471762-472706 (frame -2) on 254340
is similar to:
PaperBLAST

OXYE_STRRM / Q3S8R0: 6-methylpretetramide 4-monooxygenase; EC 1.14.13.232 from Streptomyces rimosus
oxyE / L8EVI4: 6-methylpretetramide 4-monooxygenase (EC 1.14.13.232) from Streptomyces rimosus
Q3S8R0: 6-methylpretetramide 4-monooxygenase (EC 1.14.13.232) from Streptomyces rimosus
Also see hits to annotated proteins above

45% id,
15% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory