Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 21 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0446: putative glutamate synthase subunit beta (RefSeq)
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

25% id,
35% cov

ACDD_ASPCN / A0A2I2F284: Kynurenine 3-monooxygenase acdD; Aspcandine biosynthesis gene cluster protein D; Kynurenine 3-hydroxylase acdD; EC 1.14.13.9 from Aspergillus candidus

49% id,
7% cov

DvMF_0222: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq)
is similar to:
PaperBLAST

ACDD_ASPCN / A0A2I2F284: Kynurenine 3-monooxygenase acdD; Aspcandine biosynthesis gene cluster protein D; Kynurenine 3-hydroxylase acdD; EC 1.14.13.9 from Aspergillus candidus

37% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

442678-444075 (frame +1) on 254340
is similar to:
PaperBLAST

A1Z745: kynurenine 3-monooxygenase (EC 1.14.13.9) from Drosophila melanogaster

28% id,
23% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory