Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 4 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_1717: N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq)
is similar to:

Q5JFW1: [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC from Thermococcus kodakarensis

40% id,
100% cov

lysY / Q4JAQ3: [amino-group carrier protein]-L-2-aminoadipate/[amino-group carrier protein]-L-glutamate phosphate reductase (EC; EC from Sulfolobus acidocaldarius
Q4JAQ3: [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC from Sulfolobus acidocaldarius

36% id,
100% cov

O50146: [amino group carrier protein]-6-phospho-L-2-aminoadipate reductase (EC; [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC from Thermus thermophilus

34% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory