Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 29 curated entries in PaperBLAST's database that match '2.1.1.14' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2035: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (RefSeq)
is similar to:
PaperBLAST

MetE / b3829: cobalamin-independent homocysteine transmethylase (EC 2.1.1.14) from Escherichia coli
metE: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC 2.1.1.14 from Escherichia coli
metE / P25665: cobalamin-independent homocysteine transmethylase (EC 2.1.1.14) from Escherichia coli
P25665: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Escherichia coli

53% id,
99% cov

METE_SCHPO / Q9UT19: Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme; EC 2.1.1.14 from Schizosaccharomyces pombe
met26 / RF|NP_593352.1: homocysteine methyltransferase Met26; EC 2.1.1.14 from Schizosaccharomyces pombe

47% id,
99% cov

METE_KALTU / C1KEU0: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Pollen allergen Sal k 3; SkMetE; Vitamin-B12-independent methionine synthase; Allergen Sal k 3.0101; EC 2.1.1.14 from Kali turgidum

46% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory