Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 14 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_1008: aminotransferase class I and II (RefSeq)
is similar to:

RR42_RS28295: 2-amino-3-ketobutyrate coenzyme A ligase (EC from Cupriavidus basilensis

27% id,
99% cov

PGA1_c34330: 2-amino-3-ketobutyrate coenzyme A ligase (EC from Phaeobacter inhibens

27% id,
95% cov

BWI76_RS27255: 2-amino-3-ketobutyrate coenzyme A ligase (EC from Klebsiella michiganensis

26% id,
91% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory