Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 35 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2183: malate synthase G (RefSeq)
is similar to:

Psest_0354: Malate synthase G (EC from Pseudomonas stutzeri

63% id,
100% cov

MASZ_MYCTO / P9WK16: Malate synthase G; EC from Mycobacterium tuberculosis
MASZ_MYCTU / P9WK17: Malate synthase G; EC from Mycobacterium tuberculosis
glcB / P9WK17: malate synthase G (EC from Mycobacterium tuberculosis
P9WK17: malate synthase (EC from Mycobacterium tuberculosis

62% id,
98% cov

MASZ_MYCLB / B8ZSN3: Malate synthase G; EC from Mycobacterium leprae

58% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory